Thomas Guilbert#
I am a physicist specialising in optics by training, and obtained my PhD in multiphoton microscopy in 2010 in Rennes, Brittany, France.
I spent 15 years working on a light microscopy core-facility at IMAG’IC (Institut Cochin, Paris), where I interacted with hundreds of users and specialised in data management and machine quality monitoring for reproducibility.
I now work for Inscoper (Cesson-Sévigné, Brittany, France), a young innovative company offering a range of cutting-edge microscope control solutions.
In particular, the Roboscope falls into the category of smart microscopes and should enable us to improve efficiency and speed while drastically reducing data production.
Pro-active in the field of open science, this working group is a great opportunity to work on harmonising upstream methods.
Publications: Faklaris et al. [2022], Nelson et al. [2021], McFadden et al. [2024]:
Orestis Faklaris, Leslie Bancel-Vallée, Aurélien Dauphin, Baptiste Monterroso, Perrine Frère, David Geny, Tudor Manoliu, Sylvain de Rossi, Fabrice P. Cordelières, Damien Schapman, Roland Nitschke, Julien Cau, and Thomas Guilbert. Quality assessment in light microscopy for routine use through simple tools and robust metrics. Journal of Cell Biology, September 2022. URL: http://dx.doi.org/10.1083/jcb.202107093, doi:10.1083/jcb.202107093.
David McFadden, Laszlo Barna, Luis-Francisco Acevedo-Hueso, Sergiy V Avilov, Gert-Jan Bakker, Sebastian Beer, Ivan Belyaev, Valeria Berno, Mariana T Carvalho, Yann Cesbron, Catalin Chiritescu, Orestis Faklaris, Nathalie Gaudreault, David Grunwald, Thomas Guilbert, Mathias Hammer, Rainer Heintzmann, Gerhard Holst, Ayse Aslihan Koksoy, Gabriel G Martins, Glyn Nelson, Roland Nitschke, Alex L Payne-Dwyer, Santosh Podder, Sathya Srinivasan, Kees van der Oord, Andre Zeug, and Britta Schroth-Diez. Characterization of the photon conversion factor, noise, and dynamic range of light microscope detection systems v1. protocols.io, September 2024. URL: http://dx.doi.org/10.17504/protocols.io.14egn61pyl5d/v1, doi:10.17504/protocols.io.14egn61pyl5d/v1.
Glyn Nelson, Ulrike Boehm, Steve Bagley, Peter Bajcsy, Johanna Bischof, Claire M. Brown, Aurélien Dauphin, Ian M. Dobbie, John E. Eriksson, Orestis Faklaris, Julia Fernandez‐Rodriguez, Alexia Ferrand, Laurent Gelman, Ali Gheisari, Hella Hartmann, Christian Kukat, Alex Laude, Miso Mitkovski, Sebastian Munck, Alison J. North, Tobias M. Rasse, Ute Resch‐Genger, Lucas C. Schuetz, Arne Seitz, Caterina Strambio‐De‐Castillia, Jason R. Swedlow, Ioannis Alexopoulos, Karin Aumayr, Sergiy Avilov, Gert‐Jan Bakker, Rodrigo R. Bammann, Andrea Bassi, Hannes Beckert, Sebastian Beer, Yury Belyaev, Jakob Bierwagen, Konstantin A. Birngruber, Manel Bosch, Juergen Breitlow, Lisa A. Cameron, Joe Chalfoun, James J. Chambers, Chieh‐Li Chen, Eduardo Conde‐Sousa, Alexander D. Corbett, Fabrice P. Cordelieres, Elaine Del Nery, Ralf Dietzel, Frank Eismann, Elnaz Fazeli, Andreas Felscher, Hans Fried, Nathalie Gaudreault, Wah Ing Goh, Thomas Guilbert, Roland Hadleigh, Peter Hemmerich, Gerhard A. Holst, Michelle S. Itano, Claudia B. Jaffe, Helena K. Jambor, Stuart C. Jarvis, Antje Keppler, David Kirchenbuechler, Marcel Kirchner, Norio Kobayashi, Gabriel Krens, Susanne Kunis, Judith Lacoste, Marco Marcello, Gabriel G. Martins, Daniel J. Metcalf, Claire A. Mitchell, Joshua Moore, Tobias Mueller, Michael S. Nelson, Stephen Ogg, Shuichi Onami, Alexandra L. Palmer, Perrine Paul‐Gilloteaux, Jaime A. Pimentel, Laure Plantard, Santosh Podder, Elton Rexhepaj, Arnaud Royon, Markku A. Saari, Damien Schapman, Vincent Schoonderwoert, Britta Schroth‐Diez, Stanley Schwartz, Michael Shaw, Martin Spitaler, Martin T. Stoeckl, Damir Sudar, Jeremie Teillon, Stefan Terjung, Roland Thuenauer, Christian D. Wilms, Graham D. Wright, and Roland Nitschke. Quarep‐limi: a community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy. Journal of Microscopy, 284(1):56–73, August 2021. URL: http://dx.doi.org/10.1111/jmi.13041, doi:10.1111/jmi.13041.